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Centre for Neuroscience & Regenerative Medicine
- Sydney, Australia
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Course material in notebook format for learning about single cell bioinformatics methods
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
A example pipeline for WGS resequencing analysis
R script used to identify SNPs present in coding region of genes from VCF files
Training and demo material for whole-genome analysis craft
Structural variation analysis pipeline for cancer genomes
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file form…
A suite of tools for detecting expansions of short tandem repeats
By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline
Quick mining and visualization of NGS data by integrating genomic databases
LIONS is a bioinformatic analysis pipeline which brings together a few pieces of software and some home-brewed scripts to annotate a paired-end RNAseq library to detect TE-intiated transcripts
Single-cell analysis in Python. Scales to >1M cells.
R script for visualizing exon-exon junctions in genomic sequencing reads
Variant Calling Tool for Circular Consensus Sequencing
Benchmark datasets for WGS analysis
Whole Genome Sequenceing Structural Variation Pipelines
This repo contains tutorials for different NGS analysis methods