Loosen voila requirement and update pinned requirements (PlasmaPy#2609)

* Loosen voila requirement

* Adjust voila requirement

* Update auto-generated requirements

* Add comments about setting package requirements

* Add comments about setting package requirements

pyproject.toml

@@ -21,6 +21,9 @@ keywords = [
  "space plasmas",
 ]
 license = {file = "LICENSE.md"}
+# NumPy Enhancement Proposal 29 recommends that packages support minor
+# releases of Python for 42 months after the initial release (see
+# https://numpy.org/neps/nep-0029-deprecation_policy.html#support-table).
 requires-python = ">=3.10"
 classifiers = [
  "Development Status :: 4 - Beta",
@@ -36,6 +39,13 @@ classifiers = [
 dynamic = [
  "version",
 ]
+# SPEC 0 recommends that support for core packages should generally be
+# dropped two years after their initial release (see
+# https://scientific-python.org/specs/spec-0000). Exceptions may include
+# critical bugfixes or when making use of important new features. Any
+# upper limits on package versions should be temporary because they can
+# make it harder to resolve environments when PlasmaPy is installed
+# alongside other packages, such as in the heliopythoniverse.
 dependencies = [
  "astropy >= 5.1",
  "h5py >= 3.7.0",
@@ -52,11 +62,13 @@ dependencies = [
  "scipy >= 1.8.0",
  "setuptools >= 61.2.0",
  "tqdm >= 4.60.0",
- "voila >= 0.5.0",
+ "voila >= 0.4.0",
  "wrapt >= 1.14.0",
  "xarray >= 2022.3.0",
 ]
 [project.optional-dependencies]
+# The documentation build occurs in an isolated environment that is not
+# user-facing, so we can have stricter requirements.
 docs = [
  "docutils >= 0.20.1",
  "jinja2 >= 3.1.3",
@@ -83,9 +95,11 @@ docs = [
  "sphinxcontrib-globalsubs >= 0.1.1",
  "towncrier >= 23.11.0",
  "tox >= 4.12.1",
- "tox-uv >= 1.6.0",
+ "tox-uv >= 1.7.0",
  "unidecode >= 1.3.8",
 ]
+# Test dependencies are not user-facing, so we can set stricter
+# requirements to ensure that tests are run in consistent environments.
 tests = [
  "hypothesis >= 6.97.4",
  "pre-commit >= 3.6.0",
@@ -95,7 +109,7 @@ tests = [
  "pytest-xdist >= 3.5.0",
  "tomli >= 2.0.1",
  "tox >= 4.12.1",
- "tox-uv >= 1.6.0",
+ "tox-uv >= 1.7.0",
 ]
 [project.urls]
 Changelog = "https://docs.plasmapy.org/en/stable/whatsnew/index.html"

requirements.txt

@@ -52,7 +52,7 @@ comm==0.2.2
  # via
  # ipykernel
  # ipywidgets
-contourpy==1.2.0
+contourpy==1.2.1
  # via matplotlib
 cycler==0.12.1
  # via matplotlib
@@ -239,7 +239,7 @@ parso==0.8.3
  # via jedi
 pexpect==4.9.0
  # via ipython
-pillow==10.2.0
+pillow==10.3.0
  # via
  # matplotlib
  # sphinx-gallery
@@ -339,7 +339,7 @@ rpds-py==0.18.0
  # via
  # jsonschema
  # referencing
-scipy==1.12.0
+scipy==1.13.0
  # via lmfit
 send2trash==1.8.2
  # via jupyter-server
@@ -457,13 +457,13 @@ uri-template==1.3.0
  # via jsonschema
 urllib3==2.2.1
  # via requests
-uv==0.1.26
+uv==0.1.28
  # via tox-uv
 virtualenv==20.25.1
  # via
  # pre-commit
  # tox
-voila==0.5.5
+voila==0.5.6
 wcwidth==0.2.13
  # via prompt-toolkit
 webcolors==1.13

requirements/requirements_docs_py312.txt

@@ -19,7 +19,7 @@ charset-normalizer==3.3.2
 click==8.1.7
 colorama==0.4.6
 comm==0.2.2
-contourpy==1.2.0
+contourpy==1.2.1
 cycler==0.12.1
 debugpy==1.8.1
 decorator==5.1.1
@@ -77,7 +77,7 @@ pandas==2.2.1
 pandocfilters==1.5.1
 parso==0.8.3
 pexpect==4.9.0
-pillow==10.2.0
+pillow==10.3.0
 platformdirs==4.2.0
 pluggy==1.4.0
 prometheus-client==0.20.0
@@ -102,7 +102,7 @@ requests==2.31.0
 rfc3339-validator==0.1.4
 rfc3986-validator==0.1.1
 rpds-py==0.18.0
-scipy==1.12.0
+scipy==1.13.0
 send2trash==1.8.2
 setuptools==69.2.0
 six==1.16.0
@@ -146,9 +146,9 @@ uncertainties==3.1.7
 unidecode==1.3.8
 uri-template==1.3.0
 urllib3==2.2.1
-uv==0.1.26
+uv==0.1.28
 virtualenv==20.25.1
-voila==0.5.5
+voila==0.5.6
 wcwidth==0.2.13
 webcolors==1.13
 webencodings==0.5.1