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  1. centrifuger centrifuger Public

    Classifier for metagenomic sequences using FM-index with run-block compressed BWT.

    C++ 38 3

  2. liulab-dfci/TRUST4 liulab-dfci/TRUST4 Public

    TCR and BCR assembly from RNA-seq data

    C 263 46

  3. T1K T1K Public

    T1K is a versatile methods to genotype highly polymorphic genes (e.g. KIR, HLA) with bulk or single-cell RNA-seq, WGS or WES data.

    C 42 6

  4. splicebox/PsiCLASS splicebox/PsiCLASS Public

    Simultaneous multi-sample transcript assembler for RNA-seq data

    C 16 4

  5. Lighter Lighter Public

    Fast and memory-efficient sequencing error corrector

    C++ 92 17

  6. Rcorrector Rcorrector Public

    Error correction for Illumina RNA-seq reads

    C++ 60 18