Electronic Health Record Analysis with Python.

Perturbation Analysis in the scverse ecosystem.

💫 Deploy SPARQL endpoints from RDFLib Graphs to serve RDF files, machine learning models, or any other logic implemented in Python

LIANA+: an all-in-one framework for cell-cell communication

Registry for scverse ecosystem packages (https://scverse.org/packages/#ecosystem)

Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.

Count ratio uncertainty modeling base linear regression

Analysis using crumblr

Perform differential expression analysis on multi-sample single cell datasets using linear mixed models

Single-cell analysis in Python. Scales to >1M cells.

Network annotation visualization