Repository of data files for phylodynamics research

1. New York influenza BEAST XML for inferring genealogy using sequence data from [1].

   • NewYork.xml

2. Regional influenza BEAST XML for inferring genealogy using sequence data from [2].

   • Europe.xml
   • India.xml
   • JapanKorea.xml
   • NorthChina.xml
   • Oceania.xml
   • SouthAmerica.xml
   • SouthChina.xml
   • SoutheastAsia.xml
   • USACanada.xml

1. A. Rambaut, O. G. Pybus, M. I. Nelson, C. Viboud, J. K. Taubenberger, E. C. Holmes The genomic and epidemiological dynamics of human influenza A virus. Nature, 453(7195): 615–619, 2008.

2. D. Zinder, T. Bedford, E. B. Baskerville, R. J. Woods, M. Roy, M. Pascual. Seasonality in the migration and establishment of H3N2 Influenza lineages with epidemic growth and decline. BMC Evolutionary Biology, 14(1): 272, 2014.