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Issues list

Build log - identifying how many kmers were added from different files
#78 opened Jan 11, 2019 by alexa-hks
Reduce peak memory used by thread enhancement
#11 opened Aug 10, 2015 by noporpoise
Generate links info for reference sequence enhancement
#12 opened Aug 10, 2015 by noporpoise
Breakpoint caller should use novel kmers enhancement
#13 opened Aug 10, 2015 by noporpoise
GFA output should include links as paths enhancement
#20 opened Sep 17, 2015 by noporpoise
Graph format should use JSON header enhancement
#23 opened Sep 22, 2015 by noporpoise
New command: query enhancement
#24 opened Sep 22, 2015 by noporpoise
Output contigs in GFA format? enhancement
#27 opened Nov 16, 2015 by iqbal-lab
2
2-color cortex?
#43 opened Oct 21, 2016 by yannickwurm
3
Output interpretation
#55 opened Mar 20, 2017 by abeu9727
3
Tackle too much variation in a region
#66 opened Feb 5, 2018 by dimitrisarnellos
Finding sequences not in the reference genome
#69 opened Jul 5, 2018 by inti
Link files should use bgzf block compression enhancement
#8 opened Aug 9, 2015 by noporpoise
Compilations fails: "city.c:405:10: fatal error: 'citycrc.h' file not found"
#76 opened Nov 26, 2018 by jonchang
@noporpoise
3
Assert error during graph cleaning
#79 opened Jan 12, 2019 by lucaptra
Bug in mccortex join with --sort option
#80 opened Mar 18, 2019 by winni2k
Is it possible to extract kmers in bubbles?
#82 opened Apr 4, 2019 by zeeev
5
Is there a way to rename colors?
#83 opened Apr 26, 2019 by winni2k
Problem running make
#86 opened Jul 30, 2019 by Tj-Idowu
2
mccortex subgraph behaviour
#87 opened Aug 15, 2019 by izaak-coleman
Hash table is full
#89 opened Jun 26, 2020 by chatcrawler
mccortex unitigs: "Fatal Error: Not enough kmers in hash" or "Fatal Error: Hash table is full"
#90 opened Sep 11, 2020 by karel-brinda
2
mccortex unitigs: "Fatal Error: Couldn't read 'Coverages': expected 4; recieved: 0"
#91 opened Sep 11, 2020 by karel-brinda
Best practice for large datasets?
#92 opened Feb 4, 2021 by JohnsonStev
4
clang: error: linker command failed with exit code 1 (use -v to see invocation)
#96 opened Nov 29, 2022 by abrozzi
ProTip! Follow long discussions with comments:>50.