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Output contigs in GFA format? #27
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It might be easier to 'map' a contig onto a GFA graph, since contigs should match unitigs perfectly. It just needs a hash of first & last kmers of each unitig mapping to unitig id. Out of curiousity, what's the use case? I could throw together a script at some point. |
Use-case = that GFA represents your final assembly graph. You take your links+DBG and infer contigs, |
Any plans to output your actual contigs in GFA?
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