snipit: summarise snps relative to your reference sequence

Hypothesis-like property testing for Rust

Bacterial GWAS analysis

Painless compression and decompression in the terminal

Serialization framework for Rust

Detect and remove unused dependencies from Cargo.toml

Genome browser and variant annotation

Nightly builds for youtube-dl.

A rust console and terminal abstraction

Easily add a --verbose flag to CLIs using Clap

A date-time library for Rust that encourages you to jump into the pit of success.

Cross platform terminal library rust

A runtime for writing reliable asynchronous applications with Rust. Provides I/O, networking, scheduling, timers, ...

Command-line program to download videos from YouTube.com and other video sites

kmer based feature extraction tool for bioinformatics, metagenomics, AI/ML and more

Phage Annotation using Protein Structures

Example genomics data for tool developers

Terminal stopwatch

PDF exporter for HTML presentations

Generic distances to trees pipeline

🌸 A command-line fuzzy finder

ZSH plugin to enable fzf searches of a lot more stuff - docker, tmux, homebrew and more.

PopPUNK 👨‍🎤 (POPulation Partitioning Using Nucleotide Kmers)

Standardized attributes for labelling sequence datasets with known quality control issues

Plasmid analysis using rearrangement distances

Select primer sets for selective whole genome amplification (SWGA)

Enhanced ChatGPT Clone: Features Anthropic, OpenAI, Assistants API, Azure, Groq, GPT-4 Vision, Mistral, OpenRouter, Vertex AI, Gemini, AI model switching, message search, langchain, DALL-E-3, ChatG…

Efficient phylogenetic tree inference for massive taxonomic datasets

RawHash is the first mechanism that can accurately and efficiently map raw nanopore signals to large reference genomes (e.g., a human reference genome) in real-time without using powerful computati…

Rapid estimation of phylogenetic trees using sketching