Better defaults

mathiser · Jun 15, 2023 · 9f03555 · 9f03555
1 parent 044c676
commit 9f03555
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/rt_utils/smoothing.py b/rt_utils/smoothing.py
@@ -10,8 +10,8 @@
  "filter_iterations": 3,
  "crop_margins": [20, 20, 1],
  "np_kron": {"scaling_factor": 3},
- "ndimage_gaussian_filter": {"sigma": 2,
- "radius": 3},
+ "ndimage_gaussian_filter": {"sigma": 5,
+ "radius": 5},
  "threshold": {"threshold": 0.5},
 }
 
@@ -165,8 +165,8 @@ def get_final_mask_shape_and_bbox(mask, bbox, scaling_factor, scaling_iterations
 
  bbox[:4] *= final_scaling_factor # Scale bounding box to final shape
  bbox[:4] -= round(final_scaling_factor * 0.5) # Shift volumes to account for the shift that occurs as a result of the scaling
- logging.info("Final shape: ", final_shape)
- logging.info("Final bbox: ", bbox)
+ logging.info("Final shape: {}".format(final_shape))
+ logging.info("Final bbox: {}".format(bbox))
  return final_shape, bbox