Add desamba.h and makefile support for .so file, to allow keeping index in memory and classify and analysis countless times.
If you really want to use it, please read the source code. If you can't read well, please contact me.
make rebuild -C src!!!BUILD jellyfish-1.1.12 by YOURSELF!!!
mkdir bin
mv path/to/jellyfish bin/jellyfish
bash build-index demo/human.fa demo_index/human
cp nodes.dmp names.dmp demo_index/humangcc main_test.c -o main_test && ./main_test bin/libdesamba.so demo_index/join demo/test1.fqbin/deSAMBA classify demo_index/human demo/human.fq > /tmp/deSAMBA.sam
bin/deSAMBA analysis ana_meta /tmp/deSAMBA.sam demo_index/nodes.dmp