Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

options.py #25

Open
rongyua opened this issue Dec 24, 2023 · 1 comment
Open

options.py #25

rongyua opened this issue Dec 24, 2023 · 1 comment

Comments

@rongyua
Copy link

rongyua commented Dec 24, 2023

parser.add_argument('--use_bilinear', type=int, default=1)
parser.add_argument('--path_gate', type=int, default=1)
parser.add_argument('--grph_gate', type=int, default=1)
parser.add_argument('--omic_gate', type=int, default=1)
parser.add_argument('--path_scale', type=int, default=1)
parser.add_argument('--grph_scale', type=int, default=1)
parser.add_argument('--omic_scale', type=int, default=1)
Can you tell me the use of these parameters in the options.py file?
When I run the GCN+SNN code, I get an error using the command you gave me.
FileNotFoundError: [Errno 2] No such file or directory: './data/TCGA_GBMLGG/all_st_patches_512_cpc/TCGA-12-0616-01Z-00-DX3.b426f381-b175-4a6d-957e-2dbfed42caeb_2_256_0.pt'.
But it can run after deleting some of the above parameters in the code you gave.
Can you please answer this?

@yan87658765
Copy link

Hi, I met the same issue you mentioned. When I was running the CNN+GCN+SNN model with the exact same command in README, the error is [Errno 2] No such file or directory: './data/TCGA_GBMLGG/all_st_patches_512_cpc/TCGA-S9-A6UA-01Z-00-DX1.99AB8786-858B-46A0-94BA-C5AA1CD5351B_1_512_256.pt'. I am wondering how you delete some of the parameters to let the code run? Much appreciated.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants