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  • Testing building mulled containers for multi-requirement tools.

    Updated Jul 18, 2024
  • minimap2 Public

    Forked from lh3/minimap2

    A versatile pairwise aligner for genomic and spliced nucleotide sequences

    C Other Updated Jun 25, 2024
  • misc Public

    Python MIT License Updated Jun 10, 2024
  • modules Public

    Forked from nf-core/modules

    Repository to host tool-specific module files for the Nextflow DSL2 community!

    Nextflow MIT License Updated Jun 4, 2024
  • A pipeline to run and systematically evaluate Multiple Sequence Alignment (MSA) methods.

    Nextflow MIT License Updated May 29, 2024
  • syri Public

    Forked from schneebergerlab/syri

    Synteny and Rearrangement Identifier

    Cython MIT License Updated May 15, 2024
  • configs Public

    Forked from nf-core/configs

    Config files used to define parameters specific to compute environments at different Institutions

    Nextflow MIT License Updated Apr 19, 2024
  • Conda recipes for the bioconda channel.

    Shell MIT License Updated Mar 27, 2024
  • MAGUS Public

    Forked from vlasmirnov/MAGUS

    Graph Clustering Merger

    Python 1 MIT License Updated Mar 19, 2024
  • nf-test Public

    Forked from askimed/nf-test

    Simple test framework for Nextflow pipelines

    Java MIT License Updated Mar 18, 2024
  • Test data to be used for automated testing with the nf-core pipelines

    MIT License Updated Nov 15, 2023
  • nextflow Public

    Forked from nextflow-io/nextflow

    A DSL for data-driven computational pipelines

    Groovy Apache License 2.0 Updated Oct 20, 2023
  • verkko Public

    Forked from marbl/verkko
    Python Updated Aug 17, 2023
  • Parallelized and efficient implementation of the bogosort algorithm.

    Rust MIT License Updated Apr 16, 2023
  • latexdem Public

    Demonstration of a simple worksheet solution and presentation using LaTeX, made for GumbelTalks 2023

    TeX 1 MIT License Updated Apr 15, 2023
  • pysam Public

    Forked from pysam-developers/pysam

    Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.

    C MIT License Updated Mar 15, 2023
  • hometools Public

    Forked from mnshgl0110/hometools

    collection of command-line functions used to perform multiple small frequently required analysis

    Python MIT License Updated Feb 22, 2023
  • simba Public

    Forked from dimforge/simba

    Set of mathematical traits to facilitate the use of SIMD-based AoSoA (Array of Struct of Array) storage pattern.

    Rust Apache License 2.0 Updated Oct 29, 2022
  • exports UPF University calendar to google calendar

    Python Updated Dec 5, 2021