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Starred repositories
python library for working with ontologies and ontology associations
Python library to handle Gene Ontology (GO) terms
PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering
Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.
A library for QC report based on MultiQC framework
PRESTO: Correction of turnover numbers in enzyme-constraint metabolic models
Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks
A Python Framework for Modeling and Analysis of Signaling Systems
High accuracy RAG for answering questions from scientific documents with citations
A python parametric CAD scripting framework based on OCCT
Python package for 3D geometry CAD/BIM/CAM
High performance self-hosted photo and video management solution.
The ProteoWizard Library is a set of software libraries and tools for rapid development of mass spectrometry and proteomic data analysis software.
DIA-NN - a universal automated software suite for DIA proteomics data analysis.
a full featured file system for online data storage
[NeurIPS 2024] SWE-agent takes a GitHub issue and tries to automatically fix it, using GPT-4, or your LM of choice. It can also be employed for offensive cybersecurity or competitive coding challen…
ERP beyond your fridge - Grocy is a web-based self-hosted groceries & household management solution for your home
A container for grocy - the ERP application for your kitchen https://grocy.info
Fork of overseerr for jellyfin support.
VPN client in a thin Docker container for multiple VPN providers, written in Go, and using OpenVPN or Wireguard, DNS over TLS, with a few proxy servers built-in.
A JSON-like data structure (a CRDT) that can be modified concurrently by different users, and merged again automatically.
A Python framework for high performance GPU simulation and graphics
📓 eLabFTW is the most popular open source electronic lab notebook for research labs.