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Plotting tool for HMMER3 hmm files based on TikZ

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Name		Name	Last commit message	Last commit date
Latest commit History 21 Commits
.github/workflows		.github/workflows
examples		examples
img		img
src/hmmer2pdf		src/hmmer2pdf
.gitignore		.gitignore
LICENSE		LICENSE
README.md		README.md
setup.py		setup.py

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hmmer2pdf

Features

Match and insert state color encodes emission entropy
Line width encodes transition probability
Emission probability tables for emitting states (insert and match)

Installation

pip install git+https://github.com/lkuchenb/hmmer2pdf@latest

Usage

hmmer2pdf < input.hmm > output.pdf

Requirements

Python 3.x
LaTeX suite with the tikz and standalone packages installed
lualatex in your PATH