liz-is
Follow
Stars
A simple, in-browser, markdown-driven slideshow tool.
A Resource Allocation and Finance tool for RSE Groups
Cookiecutter Django is a framework for jumpstarting production-ready Django projects quickly.
🐶 Automated code review tool integrated with any code analysis tools regardless of programming language
Custom code for the analysis of testis Slide-seq data
⌛ Add loading animations to a Shiny output while it's recalculating
Picasso: a methods for embedding points in 2D in a way that respects distances while fitting a user-specified shape.
The Research Software Engineer's Toolkit - A set of documentation, tools and guidance to support Research Software Engineers in developing reliable, sustainable and robust code
A toolkit to define the skills, competencies and diverse progression pathways for RSEs to help track and manage their professional profiles and development.
A tool for detecting somatic variants in single cell data
Seurat meets tidyverse. The best of both worlds.
A package for creating monochrome colour palettes and easily converting rgba values to hex codes
R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.
SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
Density-preserving data visualization tools den-SNE and densMAP
Unsupervised cell functional annotation for single-cell RNA-Seq
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
A computational method for inferring transcriptional regulators associated with genome-wide differential chromatin interactions.
A simple tool to perform the calculation and visualization of the average chromatin A/B compartment.
Visualizing transcript structure and annotation using ggplot2
HiC for copy Number variation and Translocation detection