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7 stars written in Nim
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fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"

Nim 262 35 Updated Feb 2, 2024

A port of ggplot2 for Nim

Nim 177 15 Updated Sep 5, 2024

nim wrapper for htslib for parsing genomics data files

Nim 155 26 Updated Aug 27, 2024

don't get DUP'ed or DEL'ed by your putative SVs.

Nim 101 9 Updated Dec 14, 2020

Detect novel (and reference) STR expansions from short-read data

Nim 61 9 Updated Aug 7, 2023

find large indels (in the blind spot between GATK/freebayes and SV callers)

Nim 39 1 Updated Dec 3, 2017

Experimental getopt, gzip reader, FASTA/Q parser and interval queries in nim-lang

Nim 32 1 Updated Apr 20, 2020