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Simple Transparent End-To-End Automated Machine Learning Pipeline for Supervised Learning in Tabular Binary Classification Data
ChIP-seq analysis notes from Ming Tang
This is a list of projects which have curated tasks specifically for new contributors. These issues are a great way to get started with a project, or to help share the load of working on open sourc…
RNAseq analysis notes from Ming Tang
Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools
Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods
Training requirements for joining projects
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution methods
STAR based ENCODE Long RNA-Seq processing pipeline
A simple Jekyll theme for words and pictures.
Public repository for the R-Ladies Philly & JAT datathon on "Exploring judicial patterns in Philadelphia courts"
A visit-based contact tracing application built to consume healthcare encounter data.
shinyWidgets : Extend widgets available in shiny
RNA-Seq Snakemake example with Jekyll homepage creation
A tidyverse compatible package for creating memes in R using the magick package.
Enhancing {ggplot2} plots with statistical analysis 📊📣
R script for multiple BAM alignments viewing using Gviz (bioconductor package)