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urchin-workflow3 Public
Snakemake workflow to analyze the single-cell RNA-seq dataset of sea urchin
R UpdatedApr 2, 2024 -
maharank-workflow Public
Snakemake workflow to generate the reference files for MahaRank
HTML UpdatedOct 27, 2023 -
urchin-integration-workflow Public
Snakemake workflow to integrate multiple single-cell RNA-seq dataset of sea urchin
R UpdatedSep 22, 2023 -
Snakemake workflow consisting of sub-worflows
Python MIT License UpdatedSep 17, 2023 -
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urchin-workflow2 Public
Snakemake workflow to analyze the single-cell RNA-seq dataset of sea urchin
Python UpdatedJan 21, 2023 -
Machima Public
Cross-omics Cell-type Deconvolution by Joint Non-negative Trifactorization
R Other UpdatedJan 12, 2023 -
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pagoda2 Public
Forked from kharchenkolab/pagoda2R package for analyzing and interactively exploring large-scale single-cell RNA-seq datasets
JavaScript UpdatedAug 26, 2022 -
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urchin-workflow Public
Snakemake workflow to analyze the bulk RNA-seq dataset of sea urchin
Python UpdatedJun 3, 2022 -
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treefit-r Public
Forked from hayamizu-lab/treefit-rTreefit: R implementaion
R GNU General Public License v3.0 UpdatedJan 13, 2022 -
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BiocStickers Public
Forked from Bioconductor/BiocStickersStickers for some Bioconductor packages - feel free to contribute and/or modify.
R UpdatedNov 5, 2021 -
BuildABiocWorkshop Public template
Forked from Bioconductor/BuildABiocWorkshopTemplate for building a bioconductor workshop package using github actions
Dockerfile Other UpdatedOct 23, 2021 -
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graphsim Public
Forked from TomKellyGenetics/graphsimR package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)
R GNU General Public License v3.0 UpdatedJul 29, 2021 -
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snakemake-exercise Public
Snakemake tutorial for bioinformatics beginners
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