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1. Homogenized-Cone-Outersegment-FEM Homogenized-Cone-Outersegment-FEM Public

   Repository contains the matlab based code needed to run our research team's homogenized, finite element model of cone visual transduction.

   MATLAB 1

2. Homogenized-Rod-Outersegment-FEM Homogenized-Rod-Outersegment-FEM Public

   This repository contains our research team's MATLAB based FEM code for simulating visual transduction in rod photoreceptor cells. Data sheets for salamander and mouse are included.

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3. Homogenized-Cone-Sensitivity-Analysis Homogenized-Cone-Sensitivity-Analysis Public

   This repository contains our research team's MATLAB based FEM code for performing MCMC stochastic fitting and sensitivity analysis for cone photoreceptor cells. Data sheets fitted to mouse and stri…

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4. ohio-vaccinations ohio-vaccinations Public

   Julia v1.6.0 software suite for performing age-stratified COVID predictions and parameter estimations by Metropolis-within-Gibbs MCMC. Data files are taken from ODH's public website, CDC and US Cen…

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5. PDE-Vax PDE-Vax Public

   This repository performs PDE-DSA by the flow formulation of the implicit boundary conditions presented in our paper. This analysis is demonstrated using Ohio Covid epidemic data from 2020-2021. Thi…

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6. covid_dust covid_dust Public

   Software suite for Bayesian inference of number of infected individuals in a building based on PCR-dust data

   Jupyter Notebook