Poster of 2200 jōyō and WaniKani kanji

Integrated computational design of gene entanglements

metagenome simulation for targeted and reduced-representation sequencing

DATA for GENTANGLE

multiple GNOME terminals in one window

Python bindings for the BLAKE3 cryptographic hash function

Protein Annotation by Residue-Specific Enrichment: a site-based statistical method for interpretable protein function annotation

Collection of library stubs for Python, with static types

LucaProt: A novel deep learning framework that incorporates protein amino acid sequence and structure information to predict protein function.

Fully convolutional deep learning variant effect predictor architecture

A pipeline that ingests SARS-CoV-2 (i.e. nCoV) data from GISAID and Genbank, transforms it, stores it on S3, and triggers Nextstrain nCoV rebuilds.

NCBI C++ Toolkit package sources

Binary encoding with base-2048 in Python with Rust

Base4096 encoding and decoding functions

Unicode's answer to Base64

Binary-to-text encoding highly optimised for UTF-16

📚 Parameterize, execute, and analyze notebooks

SingularityCE is the Community Edition of Singularity, an open source container platform designed to be simple, fast, and secure.

Pod5: a high performance file format for nanopore reads.

Compile your Julia Package

a tool for simulating nanopore raw signal data

🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.

LoFreq Star: Sensitive variant calling from sequencing data

Python library for pipelines around CAMEOX

OrthoDB-based multiple MSA generation

Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client