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Cross-species modeling of plant genomes

Python 10 Updated Oct 30, 2024

deep learning-inspired explainable sequence model for transcription initiation

Python 89 7 Updated Sep 27, 2024

Source code of "Learning nonlinear operators in latent spaces for real-time predictions of complex dynamics in physical systems."

Python 51 12 Updated Jul 25, 2024

Source code of "On the influence of over-parameterization in manifold based surrogates and deep neural operators".

Jupyter Notebook 5 Updated Nov 5, 2023

Source code of "Manifold learning for coarse-graining atomistic simulations: Application to amorphous solids".

Roff 7 1 Updated Feb 2, 2022

Code necessary to reproduce experiments in "FloraBERT: cross-species transfer learning with attention-based neural networks for gene expression prediction"

Python 10 9 Updated Jul 6, 2022

Genomic Pre-trained Network

Jupyter Notebook 186 24 Updated Oct 10, 2024

[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome

Shell 271 62 Updated Aug 23, 2024

Visualizer for neural network, deep learning and machine learning models

JavaScript 28,054 2,777 Updated Nov 6, 2024

Advanced AI Explainability for computer vision. Support for CNNs, Vision Transformers, Classification, Object detection, Segmentation, Image similarity and more.

Python 10,506 1,553 Updated Oct 19, 2024

The source code for "Deep transfer learning for conditional shift in regression"

Python 16 3 Updated Jun 16, 2021

Investigating PINNs

Jupyter Notebook 502 131 Updated Aug 13, 2021

JHU Dissertation LaTeX mwe

TeX 30 37 Updated Jan 9, 2020

PDEBench: An Extensive Benchmark for Scientific Machine Learning

Python 752 87 Updated Nov 4, 2024

Source code of 'Deep transfer operator learning for partial differential equations under conditional shift'.

Python 61 9 Updated Aug 4, 2023

Collection of LaTeX resources and examples.

TeX 530 136 Updated Nov 3, 2022

Learning in infinite dimension with neural operators.

Python 2,091 553 Updated Nov 6, 2024

A flexible framework for solving PDEs with modern spectral methods.

Python 513 121 Updated Sep 27, 2024

A tensorflow implementation of Facial Landmark Detection by Deep Multi-task Learning

Python 56 18 Updated Mar 22, 2017

Matlab implementation of facial landmark detection by deep multi-task learning

MATLAB 232 89 Updated Oct 25, 2016

This is an implementation of Task Constrained Convolution Neural Network (TCDCN) which detects 5 landmarks (Both eyes, nose and both ends of lips) on a facial picture. Our model take in a list of d…

Python 7 2 Updated Jan 7, 2018

Unifying Variational Autoencoder (VAE) implementations in Pytorch (NeurIPS 2022)

Python 1,815 163 Updated Jul 31, 2024

The purpose of this repo is to make it easy to get started with JAX, Flax, and Haiku. It contains my "Machine Learning with JAX" series of tutorials (YouTube videos and Jupyter Notebooks) as well a…

Jupyter Notebook 656 98 Updated Nov 29, 2023

A Tensorflow implementation of CapsNet(Capsules Net) in paper Dynamic Routing Between Capsules

Python 3,799 1,161 Updated Dec 22, 2018

Python Dynamic Mode Decomposition

Python 882 304 Updated Nov 1, 2024

A Sensitivity and uncertainty analysis toolbox for Python based on the generalized polynomial chaos method

Jupyter Notebook 76 24 Updated Oct 29, 2024

UQpy (Uncertainty Quantification with python) is a general purpose Python toolbox for modeling uncertainty in physical and mathematical systems.

Python 277 81 Updated Nov 4, 2024

PyDEns is a framework for solving Ordinary and Partial Differential Equations (ODEs & PDEs) using neural networks

Jupyter Notebook 289 65 Updated Feb 9, 2024
Jupyter Notebook 231 119 Updated Nov 4, 2022

Code release for Representation Subspace Distance for Domain Adaptation Regression (ICML 2021)

Python 75 10 Updated Oct 21, 2021
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