Lists (4)
Stars
Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch
Differentiable, Hardware Accelerated, Molecular Dynamics
A deep learning package for many-body potential energy representation and molecular dynamics
TorchCFM: a Conditional Flow Matching library
🤗 PEFT: State-of-the-art Parameter-Efficient Fine-Tuning.
Bayesian Neural Field models for prediction in large-scale spatiotemporal datasets
A collection of awesome bio-foundation models, including protein, RNA, DNA, gene, single-cell, and so on.
Bi-Directional Equivariant Long-Range DNA Sequence Modeling
Public RFDiffusionAA repo
A python/pytorch package for invertible neural networks
Benchmarks for classification of genomic sequences
Biological foundation modeling from molecular to genome scale
The programs of creating cryo-EM particle picking datasets
A Zotero plugin for syncing items and notes into Notion
🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics
Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena
A scientific image processing software suite with a focus on CryoEM and CryoET
Automatic atomic model building program for cryo-EM maps
A curated list of awesome computational cryo-EM methods.
Amortized inference for ab initio heterogeneous cryo-EM reconstruction
Neural networks for cryo-EM reconstruction
[CVPR'24 Best Student Paper] Mip-Splatting: Alias-free 3D Gaussian Splatting
[CVPR 2024 Highlight] PhysGaussian: Physics-Integrated 3D Gaussians for Generative Dynamics
[ICLR 2024] SEINE: Short-to-Long Video Diffusion Model for Generative Transition and Prediction
A new markup-based typesetting system that is powerful and easy to learn.