Skip to content

Commit

Permalink
Update README.md
Browse files Browse the repository at this point in the history
  • Loading branch information
junjunlab committed Sep 3, 2022
1 parent 4569dc1 commit 3ac9a69
Showing 1 changed file with 2 additions and 0 deletions.
2 changes: 2 additions & 0 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,8 @@

There are some packages to plot gene structures, for example [**ggbio**](https://bioconductor.org/packages/release/bioc/html/ggbio.html), [**ggtranscript**](https://github.com/dzhang32/ggtranscript)... But there are still some limitations for them. The **IGV** software provides a good visualization for gene multiple isoforms. If you want to plot **protein-coding** or **non-coding genes**, it seems a little bit difficult for you to draw with a lot of codes. Here I developed a small R package named [**transPlotR**](https://github.com/junjunlab/transPlotR) which make gene structure visualization much easier. You can provide a little parameters to **trancriptVis** to make a plot with your own **GTF** files.

<!-- badges: end -->

## Installation

You can install the development version of transPlotR like so:
Expand Down

0 comments on commit 3ac9a69

Please sign in to comment.