A Python implementation of Partial Least Squares (PLS) decomposition

Jupyter Kernel for Matlab

Create an academic personal website on Jekyll and GitHub Pages

A user-friendly, highly customizable R package for building horizon plots in ggplot2

A geom for ggplot to create bump plots

A curated list of awesome ggplot2 tutorials, packages etc.

Gradient Unwarping in Python

HTML output formats for RMarkdown documents

Mastering Shiny: a book

Organization of work around R and RStudio

Learn Go with test-driven development

🎨 High performances Golang server for generating social share images dynamically (beta).

CSS files and a template for using Pandoc to generate standalone HTML files

For temporal mapper code

Scripts accompanying the "Demonstrating Quality Control (QC) Procedures in fMRI" project

Reinforcement Learning Cheat Sheet

Implementation of Reinforcement Learning Algorithms. Python, OpenAI Gym, Tensorflow. Exercises and Solutions to accompany Sutton's Book and David Silver's course.

Reinforcement learning resources curated

MATLAB code and data files related to Raut et al. 2021 Science Advances

LaTeX templates for manuscripts. bioRxiv preprint and journal submission templates. For use on Overleaf.

Implementation of the neuroquery encoding model that powers neuroquery.org

Materials and MATLAB Psychtoolbox code for running the Why/How Localizer Task

PCAfold: Python software to generate, analyze and improve PCA-derived low-dimensional manifolds. To cite this software publication: https://www.sciencedirect.com/science/article/pii/S2352711020303435

A curated collection of resources and research related to the geometry of representations in the brain, deep networks, and beyond

Dynamical Similarity Analysis code accompanying the paper "Beyond Geometry: comparing the temporal structure of computation in neural circuits via dynamical similarity analysis"

Dynamical Neuroimaging Spatiotemporal Representations (DyNeuSR)

Code repository for Ito & Murray (2023) Nature Neuroscience