Debug update of code to 3.40 (#35)

* added new src 1

* added new src 2

* added new src 2

* added new src 2

* added new src

* added atime.f but it is not used'

* added unitset'

* added new src amode

* added new src avl.f

* added more variables but reduced size

* updated amake

* added remaining changes to AVL.inc

* fixed *DIR error in exec newton system

* bump version

* updated ad files

---------
Co-authored-by: josh <[email protected]>

fix CLAF wirte check

save body data and write it back out (#32)

* save body data and write it back out

fix boday nsec overwrite (#30)

* fix boday nsec overwrite

* bump version

---------

Co-authored-by: Joshua Anibal <[email protected]>

fixed bugs with bodies (#28)

* fixed bugs with bodies

* adding missing files for test

* Update .cirrus.yml for new brew behavior

---------

Co-authored-by: Joshua Anibal <[email protected]>

Adds Parameter and Reference values api and derivs (#27)

* ready for tapenade run

* added param and ref derivs

* bump version

---------

Co-authored-by: Joshua Anibal <[email protected]>

fixed bugs with surface panneling and mirrored surfaces (#26)

Co-authored-by: Josh Anibal <[email protected]>

added custom geom parametrization example

fix output of section only spacing (#24)

Co-authored-by: Josh Anibal <[email protected]>

added stab derivs to om wrapper (#23)

* added stab derivs to om wrapper and created new more realistic mp example
---------

Co-authored-by: Josh Anibal <[email protected]>