Skip to content

Commit

Permalink
initial commit
Browse files Browse the repository at this point in the history
  • Loading branch information
jhrcook committed Feb 22, 2019
0 parents commit fdef4df
Show file tree
Hide file tree
Showing 7 changed files with 769 additions and 0 deletions.
2 changes: 2 additions & 0 deletions .Rbuildignore
Original file line number Diff line number Diff line change
@@ -0,0 +1,2 @@
^.*\.Rproj$
^\.Rproj\.user$
40 changes: 40 additions & 0 deletions .gitignore
Original file line number Diff line number Diff line change
@@ -0,0 +1,40 @@
# Created by https://www.gitignore.io/api/macos
# Edit at https://www.gitignore.io/?templates=macos

### macOS ###
# General
.DS_Store
.AppleDouble
.LSOverride

# Icon must end with two \r
Icon

# Thumbnails
._*

# Files that might appear in the root of a volume
.DocumentRevisions-V100
.fseventsd
.Spotlight-V100
.TemporaryItems
.Trashes
.VolumeIcon.icns
.com.apple.timemachine.donotpresent

# Directories potentially created on remote AFP share
.AppleDB
.AppleDesktop
Network Trash Folder
Temporary Items
.apdisk

# End of https://www.gitignore.io/api/macos


# --- Other --- #

inst/doc
.Rproj.user/
data-raw/*.rds
.Rhistory
20 changes: 20 additions & 0 deletions DESCRIPTION
Original file line number Diff line number Diff line change
@@ -0,0 +1,20 @@
Package: HotNetvieweR
Type: Package
Title: Read HotNet2 Results and Convert to Graph object
Version: 0.0.0.9000
Author: person(c("Joshua", "H"), "Cook", email = "[email protected]",
role = c("aut", "cre"))
Description: This package reads the results from HotNet2 for further analysis.
It can return the results as a list of list of genes or transform them into
`igraph` or `tidygraph` objects.
License: file LICENSE
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.5.0)
Imports:
dplyr (>= 0.8.0),
ggplot2 (>= 3.1.0),
magrittr (>= 1.5.0),
purrr (>= 0.3.0),
rlang (>= 0.3.0),
tibble(>= 2.0.0)
20 changes: 20 additions & 0 deletions HotNetvieweR.Rproj
Original file line number Diff line number Diff line change
@@ -0,0 +1,20 @@
Version: 1.0

RestoreWorkspace: Default
SaveWorkspace: Default
AlwaysSaveHistory: Default

EnableCodeIndexing: Yes
UseSpacesForTab: Yes
NumSpacesForTab: 4
Encoding: UTF-8

RnwWeave: Sweave
LaTeX: XeLaTeX

AutoAppendNewline: Yes
StripTrailingWhitespace: Yes

BuildType: Package
PackageUseDevtools: Yes
PackageInstallArgs: --no-multiarch --with-keep.source
Loading

0 comments on commit fdef4df

Please sign in to comment.