Perl script to cluster SNPs based on their genotype.
perl ./SNPC.pl [options]
Options:
--file => Input data file.
--outputdir => Output directory. [./]
--percent => Similarity percentage cut [97]
--nind => Number of individuals [100]
Perl software to cluster SNPs based on its genotype. Genotypes should be written in (a,h,b), (a,c) and (b,d) format, "-" for No Call or as 0,1,2 genotype calls and -1 for No Call.
Jose M. Hidalgo-Lopez - [email protected]