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  • Dana-Farber Cancer Institute
  • Boston, MA

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  1. BreastCancerModelv2 BreastCancerModelv2 Public

    This program simulates the ER+ PIK3CA mutant breast cancer network models in Zañudo et al. 2020.

    Jupyter Notebook 4 1

  2. StableMotifs StableMotifs Public

    Java library that implements the attractor finding method described in Chaos 23 (2) 025111, and the control method described in https://doi.org/10.1371/journal.pcbi.1004193

    Java 12 4

  3. BooleanDynamicModeling BooleanDynamicModeling Public

    Java library to simulate Boolean Dynamic models

    Java 6 3

  4. CellFateReprogramming CellFateReprogramming Public

    Java project related to the paper "Cell fate reprogramming by control of intracellular network dynamics" (https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004193)

    Java 1 2

  5. jcrozum/pystablemotifs jcrozum/pystablemotifs Public

    Python library for attractor identification and control in Boolean networks

    Jupyter Notebook 28 7

  6. CdeCMx2020-NetworkBiology CdeCMx2020-NetworkBiology Public

    Jupyter Notebook 4 3