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Starred repositories
🌷 Vim plugin that shows keybindings in popup
Allows selection of python virtual environment from within neovim
Open source implementation of AlphaFold3
better multiprocessing and multithreading in Python
Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation
Public code for implementation and experiments with differentiable decision trees.
🚦 A pretty diagnostics, references, telescope results, quickfix and location list to help you solve all the trouble your code is causing.
Single tabpage interface for easily cycling through diffs for all modified files for any git rev.
The simplest, fastest repository for training/finetuning medium-sized GPTs.
EquiDock: geometric deep learning for fast rigid 3D protein-protein docking
Standardized data set for machine learning of protein structure
Interaction Fingerprints for protein-ligand complexes and more
A latent text-to-image diffusion model
Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology.
Working with molecular structures in pandas DataFrames
MolTrans: Molecular Interaction Transformer for Drug Target Interaction Prediction (Bioinformatics)
Hierarchical Generation of Molecular Graphs using Structural Motifs
An interactive structure/property explorer for materials and molecules
Serverside scaling for Vega and Altair visualizations
List of papers about Proteins Design using Deep Learning
Zero-copy MPI communication of JAX arrays, for turbo-charged HPC applications in Python ⚡
A Python API for the RCSB Protein Data Bank (PDB)
Incredibly fast JavaScript runtime, bundler, test runner, and package manager – all in one
