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Releases: jedick/JMDplots

JMDplots 1.2.20

03 Jul 11:08
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  • Add plots for genoGOE paper
  • Add GTDB version 214 reference database

JMDplots 1.2.19

21 Feb 06:32
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  • Revise plots for microhum paper.

  • Add plots for carrollite paper.

  • utogig4() now shows average rankings for groups as percentage values.

  • plot_starburst() shows chemical metrics of parent taxa and their children. This is a new function modified from taxacomp() previously in geo16S_util.R and is used geo16S1() and microhum_2().

  • extdata/evdevH2O/LMM16: Save space by summing amino acid compositions for proteins in each gene age category (post-publication update of Fig. 3a in the evdevH2O paper).

JMDplots 1.2.18

02 Aug 03:56
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  • Revise plots for microhum paper.

  • Add plots for chem16S paper.

JMDplots 1.2.17

13 Feb 07:04
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  • Add plots for sars16S paper.

  • Revise plots for orp16S paper.

JMDplots 1.2.16

24 Oct 08:05
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  • Revise plots for orp16S paper.

  • Move RefSeq taxonomy and species-level amino acid compositions here from chem16S package.

JMDplots 1.2.15

11 Oct 05:27
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Revise plots for orp16S paper.

JMDplots 1.2.14

23 Sep 02:54
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Revise plots for utogig paper.

JMDplots 1.2.13

04 Jul 06:33
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  • Revise plots for orp16S paper.

  • Move RefSeq data and code for estimated community proteomes to separate chem16S package.

  • Add plots for utegig paper.

JMDplots 1.2.12

18 Feb 10:41
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Revise plots for evdevH2O paper.

JMDplots 1.2.11

27 Jan 09:17
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Revise plots for geo16S paper.