QuPath - Bioimage analysis & digital pathology

Quantitative Pathology

Add labels and comments to PRs depending on their size

Python library for analyzing mass spectrometry proteomics data.

Training/template code for PerseusR plugins on the example of profile distance calculation

Exponential Family Embeddings

.NET library to deal with TeamCity Service messages

Infers cancer driver modules from DNA, RNA, PPI and regulatory network.

The CoSE layout for Cytoscape.js by Bilkent with enhanced compound node placement.

A probabilistic programming language in TensorFlow. Deep generative models, variational inference.

Vim plugin to work with R

GO enrichment with python -- pandas meets networkx

PEG.js: Parser generator for JavaScript

Area-weighted venn-diagrams for Python/matplotlib