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Parse and process FASTA and FASTQ formatted files of biological sequences.

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jakobnissen/FASTX.jl

 
 

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FASTX

Latest Release MIT license DOI Stable documentation Latest documentation Pkg Status

Description

FASTX provides I/O and utilities for manipulating FASTA and FASTQ, formatted sequence data files.

Installation

You can install FASTX from the julia REPL. Press ] to enter pkg mode, and enter the following:

add FASTX

If you are interested in the cutting edge of the development, please check out the master branch to try new features before release.

Testing

FASTX is tested against Julia 1.X on Linux, OS X, and Windows.

Latest build status:

Unit tests Documentation

Contributing

We appreciate contributions from users including reporting bugs, fixing issues, improving performance and adding new features.

Take a look at the contributing files detailed contributor and maintainer guidelines, and code of conduct.

Backers & Sponsors

Thank you to all our backers and sponsors!

backers

Questions?

If you have a question about contributing or using BioJulia software, come on over and chat to us on the Julia Slack workspace, or you can try the Bio category of the Julia discourse site.

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Parse and process FASTA and FASTQ formatted files of biological sequences.

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