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Examples of building and running BVBRC CLI in containers

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jakekrol/bvbrc-container

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Examples of using bvbrc command-line with docker/singularity containers

Summary

  • build_*: image build scripts
  • *runner*: scripts to run BVBRC CLI
  • Dockerfile.*: dockerfile(s)
  • *.tsv: example output(s) from runner script(s)
  • *.sif: singularity image file(s)

Containers

Example

./build_singularity_image.sh
./containerized-runner-get_genome_features.sh

Miscellaneous

BVBRC: BACTERIAL AND VIRAL BIOINFORMATICS RESOURCE CENTER

Docker

Singularity

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Examples of building and running BVBRC CLI in containers

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