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ITMAT Applications

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  1. rum rum Public

    RNA-Seq Unified Mapper

    Roff 26 4

  2. Normalization Normalization Public

    RNA-Seq normalization and quantification pipeline

    Roff 10 5

  3. bio-cookbooks bio-cookbooks Public

    A Chef cookbooks repository for bioinformatics tools

    Ruby 8

  4. BEERS2 BEERS2 Public

    Python 6

  5. beers_simulator beers_simulator Public

    Perl 5 2

  6. CAMPAREE CAMPAREE Public

    Configurable And Modular Program Allowing RNA Expression Emulation

    Python 5 2

Repositories

Showing 10 of 40 repositories
  • Normalization Public

    RNA-Seq normalization and quantification pipeline

    itmat/Normalization’s past year of commit activity
    Roff 10 GPL-3.0 5 6 0 Updated Nov 12, 2024
  • BEERS2 Public
    itmat/BEERS2’s past year of commit activity
    Python 6 GPL-3.0 0 0 3 Updated Aug 20, 2024
  • ITMAT_office_houRs Public
    itmat/ITMAT_office_houRs’s past year of commit activity
    1 0 0 0 Updated Jun 4, 2024
  • CAMPAREE Public

    Configurable And Modular Program Allowing RNA Expression Emulation

    itmat/CAMPAREE’s past year of commit activity
    Python 5 GPL-3.0 2 2 0 Updated Mar 12, 2024
  • BEERS_UTILS Public

    Utilities for the BEERS 2 suite of tools.

    itmat/BEERS_UTILS’s past year of commit activity
    Python 0 GPL-3.0 0 0 1 Updated Nov 30, 2023
  • OmicsBenchmarkReport Public

    Report template for omics methods benchmarking

    itmat/OmicsBenchmarkReport’s past year of commit activity
    1 CC0-1.0 0 0 0 Updated Oct 5, 2023
  • Barrel Public
    itmat/Barrel’s past year of commit activity
    Python 0 0 0 0 Updated Aug 29, 2023
  • nitecap Public

    Nitecap is an exploratory circadian data analysis tool aimed at high-throughput omics data. It provides a web-interface to examine your dataset with highly-responsive visualizations, allowing the easy viewing of hundreds or thousands of genes or other features. Nitecap computes some standard rhythmicity tests for you, including JTK, ARSER, Lomb…

    itmat/nitecap’s past year of commit activity
    HTML 2 GPL-3.0 1 0 4 Updated Feb 16, 2023
  • rum Public

    RNA-Seq Unified Mapper

    itmat/rum’s past year of commit activity
    Roff 26 MIT 4 49 1 Updated Sep 9, 2022
  • VODKA Public
    itmat/VODKA’s past year of commit activity
    Perl 3 2 0 0 Updated Aug 23, 2020
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