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@igvteam

igvteam

Github repository for the Integrative Genomics Viewer (IGV) team.

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  1. igv.js igv.js Public

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    HTML 643 230

  2. igv-webapp igv-webapp Public

    IGV Web App

    JavaScript 117 43

  3. igv igv Public

    Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

    Java 644 387

  4. igv-reports igv-reports Public

    Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

    Python 349 52

  5. igv-notebook igv-notebook Public

    Module for embedding igv.js in an IPython notebook

    JavaScript 65 14

  6. juicebox.js juicebox.js Public

    HiC contact matrix visualization

    JavaScript 19 13

Repositories

Showing 10 of 37 repositories
  • juicebox-web Public
    igvteam/juicebox-web’s past year of commit activity
    JavaScript 2 0 3 0 Updated Nov 7, 2024
  • juicebox.js Public

    HiC contact matrix visualization

    igvteam/juicebox.js’s past year of commit activity
    JavaScript 19 MIT 13 21 0 Updated Nov 7, 2024
  • igv.js Public

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    igvteam/igv.js’s past year of commit activity
    HTML 643 MIT 230 68 1 Updated Nov 7, 2024
  • igv-webapp Public

    IGV Web App

    igvteam/igv-webapp’s past year of commit activity
    JavaScript 117 MIT 43 6 0 Updated Nov 7, 2024
  • spacewalk Public

    Spacewalk is an application for displaying and interacting with super-resolution chromatin tracing data in 3D. SpaceWalk includes igv.js and juicebox.js instances for rapid and intuitive visual comparison and interaction between 3D data and 1D genomic data.

    igvteam/spacewalk’s past year of commit activity
    JavaScript 10 MIT 1 1 0 Updated Nov 4, 2024
  • igv.js-docs Public
    igvteam/igv.js-docs’s past year of commit activity
    JavaScript 0 2 2 1 Updated Nov 1, 2024
  • igv-notebook Public

    Module for embedding igv.js in an IPython notebook

    igvteam/igv-notebook’s past year of commit activity
    JavaScript 65 MIT 14 4 0 Updated Oct 25, 2024
  • igv Public

    Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

    igvteam/igv’s past year of commit activity
    Java 644 MIT 387 155 0 Updated Oct 21, 2024
  • igv-docs Public

    Markdown-based documentation website - IGV desktop application

    igvteam/igv-docs’s past year of commit activity
    JavaScript 5 1 1 0 Updated Oct 3, 2024
  • cram-js Public Forked from GMOD/cram-js

    Read CRAM v3 and v2 in node or in the browser

    igvteam/cram-js’s past year of commit activity
    TypeScript 0 MIT 9 0 0 Updated Oct 2, 2024
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