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PyMC educational resources
A python tutorial on bayesian modeling techniques (PyMC3)
Manipulate KEGG networks as NetworkX objects in in Python
Automatic layout of labels for features in a plot.
Draws Manhattan plot and QQ plot using plink assoc output.
Processed Cell Painting Data for the LINCS Drug Repurposing Project
Python package for processing image-based profiling data
List of software packages for multi-omics analysis
Prize-Collecting Steiner Forests for Interactomes
BAyesian Model-Building Interface (Bambi) in Python.
ChIP-seq analysis notes from Ming Tang
An index of algorithms for learning causality with data
An Alfred workflow for setting daily notes in Roam, including a retrospective space
Jupyter notebooks for CellProfiler and friends
Attempt at phillip rewrite in rllib. Also attempts at training from slippi replays.
Cytoscape.js based network visualizer for Jupyter Notebook
A small library for automatically adjustment of text position in matplotlib plots to minimize overlaps.
Jupyter notebook based genomic data visualization toolkit.
An overview of algorithms for estimating pseudotime in single-cell RNA-seq data
Graph regularized nonnegative matrix factorization (GNMF) in Python
mygene is an easy-to-use Python wrapper to access MyGene.Info services.