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chromassembling
😀
chromassembling
7 followers · 10 following

Achievements

Achievement: Pull Shark

Achievements

Achievement: Pull Shark

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hyuncat/README.md

About Me

I'm Sarah, a 3rd year undergrad studying CS+math. I love art and music! Underlying most of what I do is an appreciation for the art of building and creating.

Current Research

🧩 CHROMAssembly | Columbia Gang Lab

An algorithm for finding the optimal # of unique voxel + DNA bonds to enable the self-assembly of a DNA nanoparticle lattice structure. Under supervision of Dr. Jason Kahn at Brookhaven and Dr. Oleg Gang at Columbia University.

🎻 virtuOS | NYU Dennis Shasha Group

A computational practice tool for musicians. Tracks the user's pitch over time and compares it to the MIDI score of the piece, and gives feedback on rhythm, intonation, and style. Implements PYIN algorithm for pitch detection, and dynamic time warping for MIDI-audio alignment. Under supervision of the kind NYU professor Dennis Shasha.

💬 Contact me

snorlax

Feel free to reach out at [email protected]! I'm always happy to create and work on new stuff.

Pinned Loading

  1. ganglab-bnl/chromassembly ganglab-bnl/chromassembly Public

    Algorithm and visualizations for finding the minimum unique voxels and bond colors needed to create a DNA origami lattice design.

    Jupyter Notebook

  2. RichCluster RichCluster Public

    Customizable C++ algorithm for clustering biological terms by gene similarity, compiled into an R package with supporting visualizations and for easy use.

    R

  3. virtuOS virtuOS Public

    A 'MIDI templating' system which identifies discrete note events from a music performance using a MIDI representation as a template. Characterizes the pitch, duration, and timbral qualities of each…

    Jupyter Notebook 1

  4. pre-walkwise pre-walkwise Public

    Applying the Kalman filter and Map-Matching algorithms to time-series GPS data, for preprocessing the Walkwise model training data.

    Jupyter Notebook 3 1