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mg-tk Public
metagenomic toolkit - end-to-end solution for analysing metagenomes
Perl GNU General Public License v2.0 UpdatedOct 3, 2024 -
MATAFILER Public
Metagenomic assembly, genome reconstruction and functional as well as taxonomic profiling
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lotus2 Public
Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.
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sdm Public
Fast tool for sequence related tasks
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rtk2 Public
binary for matrix operations used in MATAFILER
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canopy2 Public
canopy clustering of gene catalogues
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clusterMAGs Public
clutering of MAGs (metagenome assembled genomes) into MGS (metagenomic species)
C++ GNU General Public License v2.0 UpdatedDec 8, 2023 -
Rarefaction Public
Rarefaction scripts
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LCA Public
least common ancestor evaluation given tax database and
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bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell UpdatedSep 1, 2021 -
earlham-galaxytools Public
Forked from TGAC/earlham-galaxytoolsGalaxy tools and workflows developed at the Earlham Institute
Python MIT License UpdatedJun 8, 2021 -
brainMicrobiomeRscripts Public
Scripts for brain microbiome analysis
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