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Updated with more exhaustive DO slim to MeSH disease mappings.
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dhimmel committed May 16, 2015
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16 changes: 16 additions & 0 deletions data/DO-slim-to-mesh.tsv
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doid_code doid_name mesh_id mesh_name
DOID:2531 hematologic cancer D019337 Hematologic Neoplasms
DOID:1319 brain cancer D001932 Brain Neoplasms
DOID:1324 lung cancer D008175 Lung Neoplasms
DOID:263 kidney cancer D007680 Kidney Neoplasms
DOID:1793 pancreatic cancer D010190 Pancreatic Neoplasms
DOID:4159 skin cancer D012878 Skin Neoplasms
DOID:184 bone cancer D001859 Bone Neoplasms
DOID:0060119 pharynx cancer D010610 Pharyngeal Neoplasms
DOID:2394 ovarian cancer D010051 Ovarian Neoplasms
DOID:1612 breast cancer D001943 Breast Neoplasms
DOID:3070 malignant glioma D005910 Glioma
Expand All @@ -16,7 +18,9 @@ DOID:10283 prostate cancer D011471 Prostatic Neoplasms
DOID:10534 stomach cancer D013274 Stomach Neoplasms
DOID:11054 urinary bladder cancer D001749 Urinary Bladder Neoplasms
DOID:1192 peripheral nervous system neoplasm D010524 Peripheral Nervous System Neoplasms
DOID:1781 thyroid cancer D013964 Thyroid Neoplasms
DOID:3571 liver cancer D008113 Liver Neoplasms
DOID:4362 cervical cancer D002583 Uterine Cervical Neoplasms
DOID:119 vaginal cancer D014625 Vaginal Neoplasms
DOID:11934 head and neck cancer D006258 Head and Neck Neoplasms
DOID:1993 rectum cancer D012004 Rectal Neoplasms
Expand All @@ -26,10 +30,16 @@ DOID:2596 larynx cancer D007822 Laryngeal Neoplasms
DOID:2994 germ cell cancer D009373 Neoplasms, Germ Cell and Embryonal
DOID:3277 thymus cancer D013953 Thymus Neoplasms
DOID:4045 muscle cancer D009217 Myosarcoma
DOID:10021 duodenum cancer D004379 Duodenal Neoplasms
DOID:10153 ileum cancer D007078 Ileal Neoplasms
DOID:1115 sarcoma D012509 Sarcoma
DOID:11239 appendix cancer D001063 Appendiceal Neoplasms
DOID:11615 penile cancer D010412 Penile Neoplasms
DOID:11819 ureter cancer D014516 Ureteral Neoplasms
DOID:11920 tracheal cancer D014134 Tracheal Neoplasms
DOID:1245 vulva cancer D014846 Vulvar Neoplasms
DOID:13499 jejunal cancer D007580 Jejunal Neoplasms
DOID:1725 peritoneum cancer D010534 Peritoneal Neoplasms
DOID:175 vascular cancer D019043 Vascular Neoplasms
DOID:1790 malignant mesothelioma D008654 Mesothelioma
DOID:1909 melanoma D008545 Melanoma
Expand Down Expand Up @@ -59,6 +69,7 @@ DOID:12306 vitiligo D014820 Vitiligo
DOID:10871 age related macular degeneration D008268 Macular Degeneration
DOID:14221 metabolic syndrome X D024821 Metabolic Syndrome X
DOID:2841 asthma D001249 Asthma
DOID:8893 psoriasis D011565 Psoriasis
DOID:5419 schizophrenia D012559 Schizophrenia
DOID:6364 migraine D008881 Migraine Disorders
DOID:10652 Alzheimer's disease D000544 Alzheimer Disease
Expand All @@ -83,14 +94,17 @@ DOID:986 alopecia areata D000506 Alopecia Areata
DOID:11476 osteoporosis D010024 Osteoporosis
DOID:1459 hypothyroidism D007037 Hypothyroidism
DOID:2986 IgA glomerulonephritis D005922 Glomerulonephritis, IGA
DOID:0050741 alcohol dependence D000437 Alcoholism
DOID:11949 Creutzfeldt-Jakob disease D007562 Creutzfeldt-Jakob Syndrome
DOID:14227 azoospermia D053713 Azoospermia
DOID:1826 epilepsy syndrome D004827 Epilepsy
DOID:2043 hepatitis B D006509 Hepatitis B
DOID:3083 chronic obstructive pulmonary disease D029424 Pulmonary Disease, Chronic Obstructive
DOID:7693 abdominal aortic aneurysm D017544 Aortic Aneurysm, Abdominal
DOID:784 chronic kidney failure D007676 Kidney Failure, Chronic
DOID:8398 osteoarthritis D010003 Osteoarthritis
DOID:9008 psoriatic arthritis D015535 Arthritis, Psoriatic
DOID:0050742 nicotine dependence D014029 Tobacco Use Disorder
DOID:10976 membranous glomerulonephritis D015433 Glomerulonephritis, Membranous
DOID:11714 gestational diabetes D016640 Diabetes, Gestational
DOID:12365 malaria D008288 Malaria
Expand All @@ -100,12 +114,14 @@ DOID:13189 gout D015210 Arthritis, Gouty
DOID:13223 uterine fibroid D007889 Leiomyoma
DOID:14268 sclerosing cholangitis D015209 Cholangitis, Sclerosing
DOID:8986 narcolepsy D009290 Narcolepsy
DOID:90 degenerative disc disease D055959 Intervertebral Disc Degeneration
DOID:9296 cleft lip D002971 Cleft Lip
DOID:0050156 idiopathic pulmonary fibrosis D054990 Idiopathic Pulmonary Fibrosis
DOID:1094 attention deficit hyperactivity disorder D001289 Attention Deficit Disorder with Hyperactivity
DOID:11119 Gilles de la Tourette syndrome D005879 Tourette Syndrome
DOID:14004 thoracic aortic aneurysm D017545 Aortic Aneurysm, Thoracic
DOID:1595 endogenous depression D003866 Depressive Disorder
DOID:4481 allergic rhinitis D065631 Rhinitis, Allergic
DOID:4989 pancreatitis D010195 Pancreatitis
DOID:585 nephrolithiasis D053040 Nephrolithiasis
DOID:824 periodontitis D010518 Periodontitis
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4 changes: 2 additions & 2 deletions data/disease-pmids.tsv.gz
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