Skip to content

An implementation of conformal regression with Rcpp.

Notifications You must be signed in to change notification settings

gioelece/cppconformal

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

67 Commits
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

cppconformal

An implementation of conformal regression with Rcpp.

How to install

library('devtools')
devtools::install_github('gioelece/cppconformal')

How to use

To read the documentation, including this README with well-formatted math, go to https://gioelece.github.io/cppconformal/.

The library exports in R the following functions:

run_linear_conformal_single_grid(X, y, Xhat, grid_side, grid_param)
run_ridge_conformal_single_grid(X, y, Xhat, lambda, grid_side, grid_param)
run_linear_conformal_multi_grid(X, y, Xhat, grid_levels, grid_sides, initial_grid_param)
run_ridge_conformal_multi_grid(X, y, Xhat, lambda, grid_levels, grid_sides, initial_grid_param)

For example, one can call run_linear_conformal(X, Y, Xhat, grid_side, grid_param): X ($n \times p$ matrix) contains the covariates, Y ($n \times d$) is the matrix of the corresponding observed values, and one wants to construct a confidence interval for the response to the covariates Xhat ($n_0 \times p$).

To sample the response space, for the single_grid function family, a uniform grid is created. The limits of the grid for the $i$-th axis are -limit_i to +limit_i where limit_i = grid_param * max(abs(y_i)), with grid_side points for each dimension.

Instead, when using a *_multi_grid function, an initial "coarse" grid is created as before, with parameters initial_grid_param and grid_sides[0]. Then a subgrid of size grid_sides[1] is created to contain all the points (from the previous grid) where the value of $p$ is greater or equal than grid_levels[0], and so on, for all the elements of grid_levels. Note that, in order to use these functions, one needs to have a single Xhat, i.e. $n_0 = 1$.

Let $G = \text{grid_side} ^ d$ be the total number of grid points. The functions return a R list with grid ($G \times d$), containing the sampled points, and p_values ($n_0 \times G$), containing the corresponding p-values for each Xhat. For *_multi_grid functions, only the values referring to the last grid are returned, but the grid history is added as y_grid_parameters.

Remark: the intercept coefficient is not included in the prediction. To have a "typical" linear regression, one needs to add to X a column of ones.

References

Zeni G, Fontana M, Vantini S. Conformal Prediction: a Unified Review of Theory and New Challenges. arXiv:200507972 [cs, econ, stat]. Published online May 16, 2020. Accessed October 26, 2020. http:https://arxiv.org/abs/2005.07972

Vovk V, Gammerman A, Shafer G. Algorithmic Learning in a Random World. Springer; 2005.

Nouretdinov I, Gammerman J, Fontana M, Rehal D. Multi-level conformal clustering: A distribution-free technique for clustering and anomaly detection. Neurocomputing. 2020;397:279-291. doi:10.1016/j.neucom.2019.07.114

About

An implementation of conformal regression with Rcpp.

Topics

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published