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SESAME
- Allan, Jordan
Stars
Fast local thickness in 3D and 2D
ormir-mids / ormir-mids
Forked from muscle-bids/muscle-bidsConverter and utilities for the ORMIR-MIDS data format
A Pure Python, React-style Framework for Scaling Your Jupyter and Web Apps
Light-weight system monitor for X, Wayland (sort of), and other things, too
Back In Time - An easy-to-use backup tool for GNU Linux using rsync in the back
Design of positioning, lasers, filters, detectors, fixtures for open droplet sorting
Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Install & use in 5 mins.
Structure tensor 2D and 3D implementation for Python.
A JupyterLab extension to explore and visualize HDF5 file contents. Based on https://github.com/silx-kit/h5web.
An ITK module to compute 3D thickness
Numerical Tours of Signal Processing
GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data
uncbiag / ICON
Forked from HastingsGreer/InverseConsistencyA library for performing image registration using deep learning, regularized by inverse consistency
Code created to visualize the stages of skeletonization using the Lee et al. 1994 MAT skeletonization algorithm
A set of tools for characterizing and analying 3D images of porous materials
Rich-cli is a command line toolbox for fancy output in the terminal
Speed up coding/extending image analysis in Python.
Lecture materials "Bio-image analysis, biostatistics, programming and machine learning for computational biology" at the Center of Molecular and Cellular Bioengineering (CMCB) / University of Techn…
Image processing for many and multi-core platforms (see also https://github.com/CameraIA/F3D)