Successful Job Applications and Grants

Friends don't let friends make certain types of data visualization - What are they and why are they bad.

CloudForest website

Page for Workshop, "An Ecologist's Introduction to Data Science", presented at ESA/CSEE 2022 and for SORTEE

Flower Photogrammetry and 3D modelling protocol of the Joly laboratory

The Symbiota Virtual Flora/Fauna project develops on-line tools to aid the generation, exploration and management of biodiversity data (collection specimens, observations, images, checklists, keys,…

Gephi - The Open Graph Viz Platform

Increased efficiency in identifying mixed pollen samples by meta-barcoding with a dual-indexing approach - Computational methods

Repository supporting the paper Automatic flower detection and phenology monitoring using time-lapse cameras and deep learning.

Functions for phylogenetic analyses

MBASR -- MrBayes Ancestral States with R

Material suplementario (códigos R, .csv, imágenes) de cada capítulo del libro Foto-trampeo en R: Vol I

Comment on Munoz-Rodriguez et al. (2018)

Reverse Geocoding in R with Google Maps API and Photon API

Archive of Online Practical Materials for the book of Modern Phylogenetic Comparative Methods (ed. Garamszegi, 2014)

Generate Least Concern Red List assessments and point maps for SIS Connect

Deprecated - LeafMachine is a GUI that autonomously extracts leaf trait data from herbarium vouchers using CNNs, SVMs, and CV algorithms. There are two GUIs: manual version for fine-scale analyses,…

Examples of application of comparative methods in R

❗ This is a read-only mirror of the CRAN R package repository. monographaR — Taxonomic Monographs Tools

R package for fetching records from the iNaturalist API into data frames

Postprocessing gadgets for output generated by RevBayes

HybSeq Target Capture of 353 Protein Coding Genes in Any Angiosperm

An R package for quantifying color pattern variation

iDigBio API working group repository on obtaining biodiversity specimen data in R.

Phylogenomic discovery and engineering of nitrogen fixation into the bioenergy woody crop poplar

A programmatic interface to iNaturalist

Developing an app to demonstrate phylogenetic comparative methods in R.

This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees