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GO:0014823 response to activity -> "response to physical activity" #28257

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ValWood opened this issue Jun 22, 2024 · 5 comments
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GO:0014823 response to activity -> "response to physical activity" #28257

ValWood opened this issue Jun 22, 2024 · 5 comments
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@ValWood
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ValWood commented Jun 22, 2024

If this term is required the label should be changed because it is misleading.

Here the activity referred to is "physical activity" not a molecular activity

210/286 annotations are IEP

(also GO:0014865 detection of activity)

@ValWood ValWood self-assigned this Jun 24, 2024
@ValWood ValWood changed the title GO:0014823 response to activity -"Physical activity" GO:0014823 response to activity -> "response to physical activity" Jun 24, 2024
@ValWood
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ValWood commented Jun 24, 2024

Also add superclass
GO:0032501 multicellular organismal process
to give taxon restriction

@ValWood
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ValWood commented Jun 24, 2024

@pgaudet do you agree with this?

The definition is
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an activity stimulus.

but the related synonym
"response to exercise" implies this refers to physical activity?

GO:0014865 detection of activity
Is weird, but has not been used in annotation. I can obsolete that one?

@ValWood
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ValWood commented Jul 12, 2024

@pgaudet do you agree?

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pgaudet commented Jul 12, 2024

I cannot make a decision on an obsoletion without looking at the intended usage for the term. I have no time to look at 200 annotations.

@ValWood
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ValWood commented Jul 12, 2024

It just seems strange to use the term label "activity" in a label when it doesn't refer to the GO concept of "activity" (i.e molecular activity)

I thought this one would be a simple term relabelling , I didn't think we would need to check the annotations, but I guess it is possible that some of the direct annotations to the activity terms are not related to physical activity.

Screenshot 2024-07-12 at 16 34 35

I can close this one....I only opened because I was confused by the term

@ValWood ValWood closed this as completed Jul 12, 2024
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