Segment nuclei in 2D images by Laplacian of Gaussian (user defined radius) and thresholding (user defined level) followed by binary watershed transform.
This workflow is described in www.biii.eu in https://biii.eu/nuclei-segmentation-2d-imagej
forked from Neubias-WG5/W_NucleiSegmentation-ImageJ
-
Notifications
You must be signed in to change notification settings - Fork 0
exr98/W_NucleiSegmentation-ImageJ_I2K_ER
Folders and files
| Name | Name | Last commit message | Last commit date | |
|---|---|---|---|---|
Repository files navigation
About
BIAFLOWS workflow to segment clustered nuclei using a laplacian filter, thresholding and a binary watershed transform.
Resources
Stars
Watchers
Forks
Packages 0
No packages published
Languages
- Dockerfile 55.7%
- Python 44.3%