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  • University of Malaga

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Achievement: StarstruckAchievement: Arctic Code Vault ContributorAchievement: Pull Sharkx2

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  • chromeister Public

    A dotplot generator for large chromosomes

    fast lightweight genomics genome plants sequence-alignment chromosomes
    C 39 4 GNU General Public License v3.0 Updated Oct 3, 2023

  • repeatEVO Public

    C Updated Jun 21, 2022

  • cudagecko Public

    A cuda parallel implementation of the GECKO algorithm for exhaustive ungapped sequence comparisons

    Cuda 3 1 GNU General Public License v3.0 Updated Dec 6, 2021

  • DNAPERMUT Public

    A simple method to generate DNA sequence permutations with partial order constraints

    C++ Updated Nov 26, 2021

  • gecko Public

    Forked from otorreno/gecko

    GECKO pairwise genome comparison workflow

    C 2 GNU General Public License v3.0 Updated Apr 16, 2021

  • TYMA-2021 Public

    Generates dotplots using C and python

    C 3 1 Updated Mar 13, 2021

  • training-material Public

    Forked from galaxyproject/training-material

    A collection of Galaxy-related training material

    HTML MIT License Updated Feb 4, 2021

  • tools-iuc Public

    Forked from galaxyproject/tools-iuc

    Tool Shed repositories maintained by the Intergalactic Utilities Commission

    HTML MIT License Updated Jan 19, 2021

  • bioconda-recipes Public

    Forked from bioconda/bioconda-recipes

    Conda recipes for the bioconda channel.

    Shell Updated Jan 18, 2021

  • usegalaxy-eu-tools Public

    Forked from usegalaxy-eu/usegalaxy-eu-tools

    List of tools included in https://usegalaxy.eu

    Python MIT License Updated Nov 30, 2020

  • docker-geckomgv Public

    A docker configuration to run GECKO-MGV anywhere!

    Shell Updated Nov 20, 2020

  • data Public

    Updated Nov 11, 2020

  • freqnyser Public

    An frequency analysis suite for DNA sequences

    C Updated Jan 22, 2020

  • unikmers Public

    Computes HSPs using unique hits with a variable degree of uniqueness

    C Updated Sep 11, 2019

  • retro-video Public

    C code using ffmpeg to add a retro VHS effect to video files

    C 1 1 Updated May 5, 2019

  • GPUNOME-CUDA Public

    Cuda Updated Mar 15, 2019

  • GPUNOME Public

    Accelerated version of CHROMEISTER with OpenCL

    C 4 Updated Feb 15, 2019

  • GeckoMGV Public

    Forked from Sergiodiaz53/GeckoMGV

    Multigenome viewer in Django and JS - University of Málaga

    JavaScript Updated Dec 13, 2018

  • EASYparallelDispatcher Public

    Ultra-simple bash parallel dispatcher for lists of execution commands

    Shell 1 Updated Nov 16, 2018

  • uniprot2any Public

    Transforms a BLASTX output from UNIPROT database to any format, such as GI, RefSeq, GO, etc.

    C++ 1 Updated Sep 13, 2018

  • spybash2 Public

    Log your executions and watch them progress in real time!

    C Updated Jul 6, 2018

  • SchedulerSIM Public

    C++ Updated Jun 13, 2018

  • KMB-LCF Public

    Kmer-based low complexity filter

    Updated Jun 12, 2018

  • repkiller Public

    A framework for the detection of large repetitions in genomic sequences

    C++ Updated May 4, 2018

  • JOSEE Public

    C++ Updated Apr 19, 2018

  • R-AND Public

    C Updated Apr 17, 2018

  • IMSAME Public

    A Pairwise Incremental Multi-Staged Alignment Method for Metagenomes Comparison

    C 1 GNU General Public License v3.0 Updated Feb 15, 2018

  • BGALP Public

    Basic Genetic ALgorithm (and Parallel!)

    C++ Updated Jul 3, 2017

  • JADEcrossroads Public

    A crossroads simulation using JADE

    Java 1 Updated Apr 18, 2017

  • BMSAMS Public

    Bounded Multiple Sequence Alignment Made Simple

    C 1 Updated Apr 4, 2017