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@epiverse-trace

Epiverse-TRACE

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  1. sivirep sivirep Public

    Data Wrangling and Automated Reports from 'SIVIGILA' source

    R 28 3

  2. epiparameter epiparameter Public

    R package with library of epidemiological parameters for infectious diseases and functions and classes for working with parameters

    R 26 10

  3. serofoi serofoi Public

    Estimates the Force-of-Infection of a given pathogen from population based sero-prevalence studies

    R 16 4

  4. cfr cfr Public

    R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

    R 13 3

  5. vaccineff vaccineff Public

    R package with tools for estimating vaccine effectiveness and vaccine related metrics

    R 13 1

  6. finalsize finalsize Public

    R package to calculate the final size of an SIR epidemic in populations with heterogeneity in social contacts and disease susceptibility

    R 11 7

Repositories

Showing 10 of 53 repositories
  • simulist Public

    An R package for simulating line lists

    epiverse-trace/simulist’s past year of commit activity
    R 4 0 10 1 Updated Jul 1, 2024
  • linelist Public

    R package for handling linelist data

    epiverse-trace/linelist’s past year of commit activity
    R 8 4 5 (1 issue needs help) 1 Updated Jul 1, 2024
  • epiverse-trace.github.io Public

    Technical blog of the Epiverse-TRACE project, where we share opinions and investigations in R package development, or scientific software development more generally

    epiverse-trace/epiverse-trace.github.io’s past year of commit activity
    R 3 1 10 (1 issue needs help) 6 Updated Jul 1, 2024
  • cfr Public

    R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

    epiverse-trace/cfr’s past year of commit activity
    R 13 3 4 1 Updated Jul 1, 2024
  • etstats Public
    epiverse-trace/etstats’s past year of commit activity
    R 2 CC0-1.0 0 1 0 Updated Jul 1, 2024
  • .github Public
    epiverse-trace/.github’s past year of commit activity
    1 1 4 0 Updated Jul 1, 2024
  • ColOpenData Public

    ColOpenData is a package that acquires and wrangles Colombian socioeconomic, geospatial and climate data

    epiverse-trace/ColOpenData’s past year of commit activity
    R 6 1 13 2 Updated Jun 28, 2024
  • vaccineff Public

    R package with tools for estimating vaccine effectiveness and vaccine related metrics

    epiverse-trace/vaccineff’s past year of commit activity
    R 13 1 5 1 Updated Jun 28, 2024
  • shinyapps-tracelac Public
    epiverse-trace/shinyapps-tracelac’s past year of commit activity
    R 0 0 0 0 Updated Jun 28, 2024
  • sivirep Public

    Data Wrangling and Automated Reports from 'SIVIGILA' source

    epiverse-trace/sivirep’s past year of commit activity
    R 28 3 17 2 Updated Jun 27, 2024
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