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Python 14 5 Updated Feb 6, 2020

Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and host with or without metabolomics data

Python 21 11 Updated Apr 16, 2024

SRA Tools

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antiSMASH

Python 173 64 Updated Jul 8, 2024
Python 24 7 Updated Feb 23, 2024

Deep learning-based language model for glycan sequences

Jupyter Notebook 16 6 Updated Jan 17, 2020
Jupyter Notebook 6 2 Updated Apr 9, 2020

Code depository for papers

Mercury 18 19 Updated Nov 26, 2022

MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations

Jupyter Notebook 61 25 Updated Aug 2, 2024

MetaWIBELE: Workflow to Identify novel Bioactive Elements in microbiome

Python 20 3 Updated Aug 1, 2024

Open-source RAG Framework for building GenAI Second Brains 🧠 Build productivity assistant (RAG) ⚡️🤖 Chat with your docs (PDF, CSV, ...) & apps using Langchain, GPT 3.5 / 4 turbo, Private, Anthropic…

Python 34,481 3,377 Updated Aug 6, 2024

gutSMASH

Python 47 13 Updated Apr 29, 2024

The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:

MATLAB 242 305 Updated Aug 3, 2024

AutoGPT is the vision of accessible AI for everyone, to use and to build on. Our mission is to provide the tools, so that you can focus on what matters.

Python 165,488 43,881 Updated Aug 6, 2024

为GPT/GLM等LLM大语言模型提供实用化交互接口,特别优化论文阅读/润色/写作体验,模块化设计,支持自定义快捷按钮&函数插件,支持Python和C++等项目剖析&自译解功能,PDF/LaTex论文翻译&总结功能,支持并行问询多种LLM模型,支持chatglm3等本地模型。接入通义千问, deepseekcoder, 讯飞星火, 文心一言, llama2, rwkv, claude2, m…

Python 62,974 7,821 Updated Aug 5, 2024

100 Days of ML Coding

44,119 10,399 Updated Dec 29, 2023

The fastai deep learning library

Jupyter Notebook 25,980 7,537 Updated Jul 30, 2024
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🔬 Path to a free self-taught education in Bioinformatics!

5,258 885 Updated Apr 8, 2024

A curated list of awesome Bioinformatics libraries and software.

3,021 587 Updated Apr 2, 2024