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1. TCRGP TCRGP Public

   TCRGP, a novel Gaussian process method that can predict if TCRs recognize certain epitopes. This method can utilize different CDR sequences from both TCRα and TCRβ chains from single-cell data and …

   Jupyter Notebook 26 5

2. TCRconv TCRconv Public

   TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TCRs and convolutional neural networks for the prediction.

   Jupyter Notebook 22 6

3. mgpfusion mgpfusion Public

   mGPfusion is a Gaussian process based method for predicting stability changes upon single and multiple mutations of proteins that complements the available experimental data with large amounts of s…

   MATLAB 15 4

4. tcrgp_manu_hcc tcrgp_manu_hcc Public

   Forked from janihuuh/tcrgp_manu_hcc

   Analysis of HBV-specificites at the single-cell level in HCC-patients with TCRGP

   R

5. tcrconv_manu tcrconv_manu Public

   Forked from janihuuh/tcrconv_manu

   Code related to TCRconv manuscript

   R

6. hruh_webpage hruh_webpage Public

   Forked from janihuuh/hruh_webpage

   https://janihuuh.github.io/hruh_webpage/ Website for HRUH, hosted through GitHub

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