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1. erable erable Public

   Python implementation of the ERaBLE method of Binet et al. (2016)

   Jupyter Notebook

2. seurat seurat Public

   Forked from satijalab/seurat

   R toolkit for single cell genomics

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3. dlcpar dlcpar Public

   Forked from wutron/dlcpar

   Modeling gene duplication, loss, and coalescence (through parsimony)

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4. STRIDE STRIDE Public

   Forked from davidemms/STRIDE

   STRIDE: Species Tree Root Inference from Gene Duplication Events

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5. TreeShrink TreeShrink Public

   Forked from smirarab/TreeShrink

   Implementation of the TreeShrink problem

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6. PhyloPostprocessing PhyloPostprocessing Public

   Forked from bliebeskind/PhyloPostprocessing

   Little scripts for handling phylogenetic trees

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