- Chunhua Weng, FACMI, FIAHSI, Department of Biomedical Informatics, Columbia University
- Yong Chen, FACMI, Department of Biostatistics, University of Pennsylvania
- Yifan Peng, FAMIA, Department of Population Health Sciences, Weill Cornell Medicine
- R01LM014344, NIH/NLM, 2023-2028
- R01LM014573, NIH/NLM, 2024-2029
- Zhang G, Jin Q, Zhou Y, Wang S, Idnay B, Luo Y, Park E, Nestor JG, Spotnitz ME, Soroush A, Campion TR Jr, Lu Z, Weng C, Peng Y. Closing the gap between open source and commercial large language models for medical evidence summarization. NPJ Digit Med. 2024 Sep 9;7(1):239. doi: 10.1038/s41746-024-01239-w. PMID: 39251804.
- Lu Z, Peng Y, Cohen T, Ghassemi M, Weng C, Tian S. Large language models in biomedicine and health: current research landscape and future directions. J Am Med Inform Assoc. 2024 Sep 1;31(9):1801-1811. doi: 10.1093/jamia/ocae202. PMID: 39169867.
- Jin Q, Chen F, Zhou Y, Xu Z, Cheung JM, Chen R, Summers RM, Rousseau JF, Ni P, Landsman MJ, Baxter SL, Al'Aref SJ, Li Y, Chen A, Brejt JA, Chiang MF, Peng Y, Lu Z. Hidden flaws behind expert-level accuracy of multimodal GPT-4 vision in medicine. NPJ Digit Med. 2024 Jul 23;7(1):190. doi: 10.1038/s41746-024-01185-7. PMID: 39043988.
- Fang Y, Ryan P, Weng C. Knowledge-guided generative artificial intelligence for automated taxonomy learning from drug labels. J Am Med Inform Assoc. 2024 May 24:ocae105. doi: 10.1093/jamia/ocae105. Epub ahead of print. PMID: 38787964.
- Zhang G, Jin Q, Jered McInerney D, Chen Y, Wang F, Cole CL, Yang Q, Wang Y, Malin BA, Peleg M, Wallace BC, Lu Z, Weng C*, Peng Y*. Leveraging generative AI for clinical evidence synthesis needs to ensure trustworthiness. J Biomed Inform. 2024 Apr 10:104640. doi: 10.1016/j.jbi.2024.104640. Epub ahead of print. PMID: 38608915.
- Zhang G, Zhou Y, Hu Y, Xu H, Weng C*, Peng Y*. A span-based model for extracting overlapping PICO entities from RCT publications. J Am Med Inform Assoc. 2024 Mar 12:ocae065. doi: 10.1093/jamia/ocae065. Epub ahead of print. PMID: 38471120.
- Spotnitz M, Idnay B, Gordon ER, Shyu R, Zhang G, Liu C, Cimino JJ, Weng C. A Survey of Clinicians' Views of the Utility of Large Language Models. Appl Clin Inform. 2024 Mar 5. doi: 10.1055/a-2281-7092. Epub ahead of print. PMID: 38442909.
- Liu H, Soroush A, Nestor JG, Park E, Idnay B, Fang Y, Pan J, Liao S, Bernard M, Peng Y*, Weng C*. Retrieval augmented scientific claim verification. JAMIA Open. 2024 Feb 21;7(1):ooae021. doi: 10.1093/jamiaopen/ooae021. PMID: 38455840; PMCID: PMC10919922.
- Zhang D, Tong J, Stein R, Lu Y, Jing N, Yang Y, Boland MR, Luo C, Baldassano RN, Carroll RJ, Forrest CB, Chen Y. One-shot distributed algorithms for addressing heterogeneity in competing risks data across clinical sites. J Biomed Inform. 2024 Feb;150:104595. doi: 10.1016/j.jbi.2024.104595. Epub 2024 Jan 18. PMID: 38244958; PMCID: PMC11002871.
- Zang C, Zhang H, Xu J, Zhang H, Fouladvand S, Havaldar S, Cheng F, Chen K, Chen Y, Glicksberg BS, Chen J, Bian J, Wang F. High-throughput target trial emulation for Alzheimer's disease drug repurposing with real-world data. Nat Commun. 2023 Dec 11;14(1):8180. doi: 10.1038/s41467-023-43929-1. PMID: 38081829; PMCID: PMC10713627.
- Tong J, Luo C, Sun Y, Duan R, Saine E, Lin L, Peng Y, Lu Y, Batra A, Pan A, Wang O, Li R, Marks-Anglin A, Yang Y, Zuo X, Liu Y, Bian J, Kimmel SE, Hamilton K, Cuker A, Hubbard RA, Xu H, Chen Y. Confidence Score: A Data-Driven Measure for Inclusive Systematic Reviews Considering Unpublished Preprints. J Am Med Inform Assoc. 2023 Dec 8:ocad248. doi: 10.1093/jamia/ocad248. Epub ahead of print. PMID: 38065694.
- Oniani D, Hilsman J, Peng Y, Poropatich RK, Pamplin JC, Legault GL, Wang Y. Adopting and expanding ethical principles for generative artificial intelligence from military to healthcare. NPJ Digit Med. 2023 Dec 2;6(1):225. doi: 10.1038/s41746-023-00965-x. PMID: 38042910; PMCID: PMC10693640.
- Tong J, Duan R, Li R, Luo C, Moore JH, Zhu J, Foster GD, Volpp KG, Yancy WS Jr, Shaw PA, Chen Y. Quantifying and correcting bias due to outcome dependent self-reported weights in longitudinal study of weight loss interventions. Sci Rep. 2023 Nov 4;13(1):19078. doi: 10.1038/s41598-023-41853-4. Erratum in: Sci Rep. 2023 Dec 18;13(1):22546. PMID: 37925516; PMCID: PMC10625563.
- Idnay B, Fang Y, Butler A, Moran J, Li Z, Lee J, Ta C, Liu C, Yuan C, Chen H, Stanley E, Hripcsak G, Larson E, Marder K, Chung W, Ruotolo B, Weng C. Uncovering key clinical trial features influencing recruitment. J Clin Transl Sci. 2023 Sep 4;7(1):e199. doi: 10.1017/cts.2023.623. PMID: 37830010; PMCID: PMC10565197.
- Tang L, Sun Z, Idnay B, Nestor JG, Soroush A, Elias PA, Xu Z, Ding Y, Durrett G, Rousseau J*, Weng C*, Peng Y*. Evaluating Large Language Models on Medical Evidence Summarization. npj Digital Medicine. 2023 Aug 24;6(1):158. doi: 10.1038/s41746-023-00896-7. PMID: 37620423; PMCID: PMC10449915.
- Peng Y, Rousseau JF, Shortliffe EH, Weng C. AI-generated text may have a role in evidence-based medicine. Nat Med. 2023 Jul;29(7):1593-1594. doi: 10.1038/s41591-023-02366-9. PMID: 37221382.
- Kang T, Sun Y, Kim JH, Ta C, Perotte A, Schiffer K, Wu M, Zhao Y, Moustafa-Fahmy N, Peng Y, Weng C. EvidenceMap: a three-level knowledge representation for medical evidence computation and comprehension. J Am Med Inform Assoc. 2023 May 19;30(6):1022-1031. doi: 10.1093/jamia/ocad036. PMID: 36921288; PMCID: PMC10198523.
- Liu H, Peng Y, Weng C. How Good Is ChatGPT for Medication Evidence Synthesis? Stud Health Technol Inform. 2023 May 18;302:1062-1066. doi: 10.3233/SHTI230347. PMID: 37203581.
- Machine Learning in Medicine Seminar, Boston Univ/Univ Toronto/Univ Pitt/. 4/19/2024.
- Biomedical and Health Informatics research colloquium, University of Washington. 12/7/2023.